plotmrc: plot the diff scatter plot for one xcmsset objects with threshold between two groups
Description
plot the diff scatter plot for one xcmsset objects with threshold between two groups
Usage
plotmrc(list, ms = c(100, 800), inscf = 5, rsdcf = 30, imputation = "l", ...)
Arguments
- list
list with data as peaks list, mz, rt and group information
- ms
the mass range to plot the data
- inscf
Log intensity cutoff for peaks across samples. If any peaks show a intensity higher than the cutoff in any samples, this peaks would not be filtered. default 5
- rsdcf
the rsd cutoff of all peaks in all group
- imputation
parameters for `getimputation` function method
- ...
parameters for `plot` function