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enviPick (version 1.3)

Peak picking for high resolution mass spectrometry data

Description

Sequential partitioning, clustering and peak detection of centroided LC-MS mass spectrometry data (.mzXML). Interactive result and raw data plot.

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Version

Install

install.packages('enviPick')

Monthly Downloads

21

Version

1.3

License

GPL (>= 2)

Maintainer

Martin Loos

Last Published

November 29th, 2014

Functions in enviPick (1.3)

readMSdata

Read LC-HRMS measurement .mzXML data
webpick

enviPick web browser UI
mzpick

EIC peak picking
enviPick-package

Peak picking for high resolution liquid chromatography - mass spectrometry (LC-HRMS) data
plotMSlist

Interactive raw data and result viewer
writePeaklist

Export a .csv peak table from an MSlist object
mzpart

Divisive partitioning of raw LC-HRMS measurements
mzagglom

Agglomerative partitioning of raw LC-HRMS measurements
mzclust

EIC-clustering of LC-HRMS data.
enviPickbatch

Batch peak picking for several .mzXML input files
enviPickwrap

Peak detection for LC-HRMS .mzML and .mzXML data