class:EpivizBlockData

EpivizBlockData-class

Data displayed only as genomic regions (no quantitative data)

This package provides Websocket communication to the
epiviz web app (http://epiviz.cbcb.umd.edu) for interactive
visualization of genomic data. Objects in R/bioc interactive
sessions can be displayed in genome browser tracks or plots to
be explored by navigation through genomic regions. Fundamental
Bioconductor data structures are supported (e.g., GenomicRanges
and SummarizedExperiment objects), while providing an easy
mechanism to support other data structures. Visualizations
(using d3.js) can be easily added to the web app as well.

Hector Bravo

epivizr

R Interface to epiviz web app

EpivizBlockData-class function

<dl>
    <dt></dt><dd>
      <code>plot()</code>: Calls the <code>blockChart</code> method of 
      <code><a rd-options="" href="/link/EpivizDeviceMgr-class?package=epivizr&version=1.4.6" data-mini-rdoc="epivizr::EpivizDeviceMgr-class">EpivizDeviceMgr-class</a></code>.
    </dd> <dt></dt><dd>
      <code>getMeasurements()</code>: Returns a list describing data encapsulated by this object.</dd> <dt></dt><dd>
      <code>parseMeasurement(msId=NULL)</code>: Checks <code>msId==id</code>.
    </dd> </dl> 

EpivizBlockData-class: 'EpivizBlockData' objects

Description

Arguments

Methods

Details