EpivizGeneInfoData-class: 'EpivizGeneInfoData' objects
Description
Encapsulate gene annotationMethods
-
plot(): Calls the genesChart method of EpivizDeviceMgr-class.
-
getMeasurements(): Returns a list describing data
encapsulated by this object.
Details
This class extends EpivizTrackData-class. Like
its super-class, the data containing object is constrained to be of
class GIntervalTree. Ranges contained
in the object correspond to the genomic interval spanning all
annotated exons for the gene. Columns Gene and Exons are
assumed to be part of the elementMetadata of the data
containing object. Column Gene (character) is used as gene names in the
UI, column Exons (IRangesList) is used to annotate exon
start and ends.