class:EpivizWigCache

EpivizWigCache-class


Manages a data cache for external BigWig files.


This package provides Websocket communication to the
epiviz web app (http://epiviz.cbcb.umd.edu) for interactive
visualization of genomic data. Objects in R/bioc interactive
sessions can be displayed in genome browser tracks or plots to
be explored by navigation through genomic regions. Fundamental
Bioconductor data structures are supported (e.g., GenomicRanges
and RangedSummarizedExperiment objects), while providing an easy
mechanism to support other data structures. Visualizations
(using d3.js) can be easily added to the web app as well.

EpivizWigCache-class: Cache for BigWig files

Description

Arguments

Details