powered by
Calculates Faith's PD for a specific set of tips
faithPD(phy, tips)
numeric value of summed phylogenetic diversity
phylogeny of class phylo
phylo
tip names to be included
Pascal Title
Returns the sum of total branch lengths that unite a set of species. The root is always included in these calculations. If tip is just one species, then the root-to-tip distance is returned.
Faith D.P. (1992) Conservation evaluation and phylogenetic diversity. Biological Conservation, 61, 1-10.
tamiasTree faithPD(tamiasTree, c('Tamias_minimus', 'Tamias_speciosus'))
Run the code above in your browser using DataLab