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erma (version 0.4.2)

epigenomic road map adventures

Description

Software and data to support epigenomic road map adventures.

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Version

Version

0.4.2

License

Artistic-2.0

Maintainer

Vince Carey

Last Published

February 15th, 2017

Functions in erma (0.4.2)

stateProfile

create a ggplot2 visualization of chromatin states over genomic addresses for a family of cell types managed in an ErmaSet instance
ErmaSet-class

Class "ErmaSet"
erma-package

erma
genemodel

create GRanges instance with model for a gene
states_25

metadata on states of 25-state model of chromatin from ChromImpute, and on cell types in the epigenome road map of April 2015
mapmeta

create a DataFrame instance providing metadata about the Epigenomics Roadmap