deconv

Wrapper for deconvolution with a given distribution

internal

Estimate the effective reproduction number from wastewater
and clinical data sources.

David Champredon

Effective Reproduction Number Estimation

Warsame Yusuf

Irena Papst

deconv function

<dl><dt>counts</dt>
<dd>Numeric. Vector of daily counts.</dd>
<dt>dist</dt>
<dd>Numeric. Vector of discrete distributions (daily, truncated) with which we're deconvoluting counts, e.g., produced by <code>get_discrete_dist()</code></dd>
<dt>max.iter</dt>
<dd>Numeric. Maximum number of Richardson-Lucy iterations.</dd>
<dt>silent</dt>
<dd>Logical. Flag to suppress all output messages, warnings, and progress bars.</dd></dl>

Arguments

Wrapper for deconvolution with a given distribution — deconv

<dl>

<dt>counts</dt>
<dd>Numeric. Vector of daily counts.</dd>


<dt>dist</dt>
<dd>Numeric. Vector of discrete distributions (daily, truncated) with which we're deconvoluting counts, e.g., produced by <code>get_discrete_dist()</code></dd>


<dt>max.iter</dt>
<dd>Numeric. Maximum number of Richardson-Lucy iterations.</dd>


<dt>silent</dt>
<dd>Logical. Flag to suppress all output messages, warnings, and progress bars.</dd>

</dl>

deconv: Wrapper for deconvolution with a given distribution

Description

Usage

Arguments