get_realizations

Retrieve realizations for aggregated to daily inference

internal

Estimate the effective reproduction number from wastewater
and clinical data sources.

David Champredon

Effective Reproduction Number Estimation

Warsame Yusuf

Irena Papst

get_realizations function

<dl><dt>fit.reports.daily</dt>
<dd>Data frame. Realizations from daily report inference. Must at least have <code>t</code> (time index), <code>var</code> (variable name), <code>iteration</code> (realization number), and <code>value</code> (inferred count) columns.</dd>
<dt>reports</dt>
<dd>Data frame. Original aggregated reports. Must at least have <code>date</code> column.</dd></dl>

Arguments

Retrieve realizations for aggregated to daily inference — get_realizations

<dl>

<dt>fit.reports.daily</dt>
<dd>Data frame. Realizations from daily report inference. Must at least have <code>t</code> (time index), <code>var</code> (variable name), <code>iteration</code> (realization number), and <code>value</code> (inferred count) columns.</dd>


<dt>reports</dt>
<dd>Data frame. Original aggregated reports. Must at least have <code>date</code> column.</dd>

</dl>

get_realizations: Retrieve realizations for aggregated to daily inference

Description

Usage

Value

Arguments

See Also