eudract (version 0.9.0)

eudract_convert: applies a conversion using xslt from a simple xml file to a eudract compatible file, and checks against the schema

Description

applies a conversion using xslt from a simple xml file to a eudract compatible file, and checks against the schema

Usage

eudract_convert(input, output, xslt = system.file("extdata",
  "simpleToEudraCT.xslt", package = "eudract"),
  schema_input = system.file("extdata", "simple.xsd", package =
  "eudract"), schema_output = system.file("extdata", "adverseEvents.xsd",
  package = "eudract"))

Arguments

input

a character string giving the file path to the simple xml file

output

a character string naming the output file

xslt

a character string giving the file path to the xslt script. Defaults to the script provided in this package

schema_input

a character string giving the file path to the schema for the simple xml file. Defaults to the schema provided in this package

schema_output

a character string giving the file path to the schema. A copy was downloaded and is provided in this package as the default.

Value

the output from the validation against the schema. A new file is created as a side-effect, which is suitable to upload into eudraCT.

See Also

safety_summary simple_safety_xml

Examples

# NOT RUN {
safety_statistics <- safety_summary(safety,
                                    exposed=c("Experimental"=60,"Control"=67))
simple <- tempfile(fileext = ".xml")
eudract <- tempfile(fileext = ".xml")
simple_safety_xml(safety_statistics, simple)
eudract_convert(input=simple,
                output=eudract)
# }