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evola (version 1.0.7)

Evolutionary Algorithm

Description

Runs an evolutionary algorithm using the 'AlphaSimR' machinery .

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Version

Install

install.packages('evola')

Monthly Downloads

1,779

Version

1.0.7

License

GPL (>= 2)

Maintainer

Giovanny Covarrubias-Pazaran

Last Published

November 17th, 2025

Functions in evola (1.0.7)

ocsFun

Fitness function from contribution theory
pareto

plot the change of values across iterations
inbFun

Fitness function from contribution theory using only the group relationship
regFun

Fitness function from linear regressions based on mean squared error.
varQ

Extract the variance existing in the genome solutions
nQtl

Matrix of number of activated QTLs
summary.Pop

summary form an evolafit model
evolmonitor

plot the change of values across iterations
update.evolaFitMod

update form an evolafit model
ocsFunC

Fitness function from contribution theory
evolaPop-class

Genetic algorithm pop
Jr

Matrix of ones
importHaploSparse

Import haplotypes
drift

Drift of positive allele calculation
bestSol

Extract the index of the best solution
addZeros

Function to add zeros before and after a numeric vector to have the same number of characters.
freqPosAllele

Extract frequency of positive alleles
Jc

Matrix of ones
evolafit

Fits a genetic algorithm for a set of traits and constraints.
evola-package

EVOLutionary Algorithm