phylH

<code>phylH</code> calculates the phylogenetic heritability from an <code>Almer</code>
model fit and provides associated uncertainty using parametric
bootstrapping.

Provides tools for calculating evolvability parameters from estimated G-matrices as defined
in Hansen and Houle (2008) <doi:10.1111/j.1420-9101.2008.01573.x> and fits phylogenetic
comparative models that link the rate of evolution of a trait to the state of another evolving
trait (see Hansen et al. 2021 Systematic Biology <doi:10.1093/sysbio/syab079>). The package was
released with Bolstad et al. (2014) <doi:10.1098/rstb.2013.0255>, which contains some examples of use.

Geir H Bolstad

evolvability

Calculation of Evolvability Parameters

Geir H. Bolstad

phylH function

<dl><dt>mod</dt>
<dd>An object of class <code>'merMod'</code></dd>
<dt>numerator</dt>
<dd>The name of phylogenetic effect level</dd>
<dt>residual</dt>
<dd>name of the residual effect level</dd>
<dt>nsim</dt>
<dd>number of bootstraps</dd></dl>

Arguments

Author

Phylogenetic heritability — phylH

<dl>

<dt>mod</dt>
<dd>An object of class <code>'merMod'</code></dd>


<dt>numerator</dt>
<dd>The name of phylogenetic effect level</dd>


<dt>residual</dt>
<dd>name of the residual effect level</dd>


<dt>nsim</dt>
<dd>number of bootstraps</dd>

</dl>

phylH: Phylogenetic heritability

Description

Usage

Value

Arguments

Author

Examples