MosquitoBehavior

This method dispatches on the type of <code>pars$MYZpar</code>. It should,
at a minimum return the values <code>f</code>, <code>q</code>, <code>g</code> (blood feeding rate, human feeding
proportion, and mortality rate) at the current time, although it may return
vectors of these values at multiple times for models with delay. These baseline
values will be modified by the vector control component. The return type is a
named list with those 3 values, and <code>f</code> should have an <a href="/link/attr?package=exDE&version=1.0.0" data-mini-rdoc="exDE::attr">attr</a> labeled <code>time</code>
giving the time(s) in the simulation that these bionomic values correspond to.

Provides tools to set up modular ordinary and delay differential equation
models for mosquito-borne pathogens, focusing on malaria. Modular design is achieved
by S3 dispatch on parameter lists for each component which is used to compute
the full set of differential equations which may be solved using
any of the packages for numerical simulation of differential equations in R. The
methods implemented by this package are described in Wu et al. (2022) <doi:10.1101/2022.11.07.22282044>.

Sean L. Wu

exDE

Extensible Differential Equations for Mosquito-Borne Pathogen
Modeling

David L. Smith

MosquitoBehavior function

<dl><dt>t</dt>
<dd>current simulation time</dd>
<dt>y</dt>
<dd>state vector</dd>
<dt>pars</dt>
<dd>an <a href="/link/environment?package=exDE&version=1.0.0" data-mini-rdoc="exDE::environment">environment</a></dd></dl>

Arguments

This method dispatches on the type of <code>pars$MYZpar</code>. It should,
at a minimum return the values <code>f</code>, <code>q</code>, <code>g</code> (blood feeding rate, human feeding
proportion, and mortality rate) at the current time, although it may return
vectors of these values at multiple times for models with delay. These baseline
values will be modified by the vector control component. The return type is a
named list with those 3 values, and <code>f</code> should have an <a href='https://rdrr.io/r/base/attr.html'>attr</a> labeled <code>time</code>
giving the time(s) in the simulation that these bionomic values correspond to.

Compute bloodfeeding and mortality rates — MosquitoBehavior

<dl>

<dt>t</dt>
<dd>current simulation time</dd>


<dt>y</dt>
<dd>state vector</dd>


<dt>pars</dt>
<dd>an <a href='https://rdrr.io/r/base/environment.html'>environment</a></dd>

</dl>

MosquitoBehavior: Compute bloodfeeding and mortality rates

Description

Usage

Value

Arguments