make_Omega

Make the mosquito demography matrix

Provides tools to set up modular ordinary and delay differential equation
models for mosquito-borne pathogens, focusing on malaria. Modular design is achieved
by S3 dispatch on parameter lists for each component which is used to compute
the full set of differential equations which may be solved using
any of the packages for numerical simulation of differential equations in R. The
methods implemented by this package are described in Wu et al. (2022) <doi:10.1101/2022.11.07.22282044>.

Sean L. Wu

exDE

Extensible Differential Equations for Mosquito-Borne Pathogen
Modeling

David L. Smith

make_Omega function

<dl><dt>g</dt>
<dd>mortality rate</dd>
<dt>sigma</dt>
<dd>emigration rate</dd>
<dt>K</dt>
<dd>mosquito dispersal matrix</dd>
<dt>nPatches</dt>
<dd>number of patches</dd></dl>

Arguments

Make the mosquito demography matrix — make_Omega

<dl>

<dt>g</dt>
<dd>mortality rate</dd>


<dt>sigma</dt>
<dd>emigration rate</dd>


<dt>K</dt>
<dd>mosquito dispersal matrix</dd>


<dt>nPatches</dt>
<dd>number of patches</dd>

</dl>

make_Omega: Make the mosquito demography matrix

Description

Usage

Value

Arguments