make_parameters_L_basic

Make parameters for basic competition aquatic mosquito model

Provides tools to set up modular ordinary and delay differential equation
models for mosquito-borne pathogens, focusing on malaria. Modular design is achieved
by S3 dispatch on parameter lists for each component which is used to compute
the full set of differential equations which may be solved using
any of the packages for numerical simulation of differential equations in R. The
methods implemented by this package are described in Wu et al. (2022) <doi:10.1101/2022.11.07.22282044>.

Sean L. Wu

exDE

Extensible Differential Equations for Mosquito-Borne Pathogen
Modeling

David L. Smith

make_parameters_L_basic function

<dl><dt>pars</dt>
<dd>an <a href="/link/environment?package=exDE&version=1.0.0" data-mini-rdoc="exDE::environment">environment</a></dd>
<dt>psi</dt>
<dd>maturation rates for each aquatic habitat</dd>
<dt>phi</dt>
<dd>density-independent mortality rates for each aquatic habitat</dd>
<dt>theta</dt>
<dd>density-dependent mortality terms for each aquatic habitat</dd>
<dt>L0</dt>
<dd>initial conditions</dd></dl>

Arguments

Make parameters for basic competition aquatic mosquito model — make_parameters_L_basic

<dl>

<dt>pars</dt>
<dd>an <a href='https://rdrr.io/r/base/environment.html'>environment</a></dd>


<dt>psi</dt>
<dd>maturation rates for each aquatic habitat</dd>


<dt>phi</dt>
<dd>density-independent mortality rates for each aquatic habitat</dd>


<dt>theta</dt>
<dd>density-dependent mortality terms for each aquatic habitat</dd>


<dt>L0</dt>
<dd>initial conditions</dd>

</dl>

make_parameters_L_basic: Make parameters for basic competition aquatic mosquito model

Description

Usage

Value

Arguments