exp2flux : convert gene EXPression data to FBA FLUXes
The exp2flux package was designed as a tool to convert EXPression data to FBA FLUXes. Install:
This package required R version 2.10 or higher. If you are using an older version of R you will be prompted to upgrade when you try to install the package.
For install the latest stable version this package directly from GitHub:
# Install 'devtools' R package
install.packages("devtools")
# Install 'minval' package
devtools::install_github("gibbslab/exp2flux")
library("exp2flux")Available functions:
| Function | Description |
|---|---|
| exp2flux | Convert Gene Expression Data to FBA fluxes |
| fluxDifferences | Report the fold change of fluxes between two models |
Citation
Daniel Osorio, Kelly Botero, Janneth Gonzalez and Andres Pinzon-Velasco (2016). exp2flux: convert EXPression data to FBA FLUXes. R package version 0.1.