expp-package

expp

<p>The expp package provides classes and functions for the investigation of the
probability of having extra-pair young within local networks of breeding
pairs including both realized and potential extra-pairings.</p>

package


Tools and data to accompany Schlicht, L., Valcu, M., & Kempenaers, B. (2015) <doi:10.1111/1365-2656.12293>. Spatial patterns of extra-pair paternity: beyond paternity gains and losses. Journal of Animal Ecology, 84(2), 518-531.

Mihai Valcu

Spatial Analysis of Extra-Pair Paternity

Lotte Schlicht

expp-package function

<p></p><table><tr><td> <code><a rd-options="" href="/link/epp?package=expp&version=1.2.4" data-mini-rdoc="expp::epp">epp</a></code> </td>
<td> Final
data-transformation to male-female combinations and their extra-pair levels
</td>
</tr><tr><td> <code><a rd-options="" href="/link/eppSimDat?package=expp&version=1.2.4" data-mini-rdoc="expp::eppSimDat">eppSimDat</a></code> </td>
<td> "Toy"-dataset creation to investigate
potential Type I error rate inflation for models where the datapoints are
male-female combinations </td>
</tr><tr><td><p></p><p></p></td>
<td> ---------------------------------------- </td>
</tr><tr><td>
<code><a rd-options="" href="/link/DirichletPolygons?package=expp&version=1.2.4" data-mini-rdoc="expp::DirichletPolygons">DirichletPolygons</a></code> </td>
<td> Territory calculation via Dirichlet
tesselation</td>
</tr><tr><td> <code><a rd-options="" href="/link/eppMatrix?package=expp&version=1.2.4" data-mini-rdoc="expp::eppMatrix">eppMatrix</a></code> </td>
<td> <code>data.frame</code> to
<code>eppMatrix</code> object</td>
</tr><tr><td> <code><a rd-options="" href="/link/neighborsDataFrame?package=expp&version=1.2.4" data-mini-rdoc="expp::neighborsDataFrame">neighborsDataFrame</a></code> </td>
<td> <code>nb</code>
object to <code>data.frame</code></td>
</tr><tr><td> <code><a rd-options="" href="/link/SpatialPointsBreeding?package=expp&version=1.2.4" data-mini-rdoc="expp::SpatialPointsBreeding">SpatialPointsBreeding</a></code> </td>
<td>
<code>data.frame</code> to <code>SpatialPointsBreeding object</code> </td>
</tr></table>

Functions

Tools and data to accompany Schlicht, Valcu and Kempenaers "Spatial patterns
of extra-pair paternity: beyond paternity gains and losses" — expp-package

`epp`	Final data-transformation to male-female combinations and their extra-pair levels
`eppSimDat`	"Toy"-dataset creation to investigate potential Type I error rate inflation for models where the datapoints are male-female combinations
	----------------------------------------
`DirichletPolygons`	Territory calculation via Dirichlet tesselation
`eppMatrix`	`data.frame` to `eppMatrix` object
`neighborsDataFrame`	`nb` object to `data.frame`
`SpatialPointsBreeding`	`data.frame` to `SpatialPointsBreeding object`

Package:	expp
Type:	Package
Version:	1.0
Date:	2014-Aug-04
License:	GPL-3

expp-package: Tools and data to accompany Schlicht, Valcu and Kempenaers "Spatial patterns of extra-pair paternity: beyond paternity gains and losses"

Description

Arguments

Functions

Details

References