ExprsPredict-class

show,ExprsPredict-method

An object of class <code>ExprsPredict</code>.

object

An S4 class to store class predictions

Supervised machine learning has an increasingly important role in biological
studies. However, the sheer complexity of classification pipelines poses a significant
barrier to the expert biologist unfamiliar with machine learning. Moreover,
many biologists lack the time or technical skills necessary to establish their own
pipelines. This package introduces a framework for the rapid implementation of
high-throughput supervised machine learning built with the biologist user in mind.
Written by biologists, for biologists, this package provides a user-friendly interface
that empowers investigators to execute state-of-the-art binary and multi-class
classification, including deep learning, with minimal programming
experience necessary.

Thomas Quinn

exprso

Rapid Implementation of Machine Learning Algorithms for Genomic
Data

Daniel Tylee

ExprsPredict-class function

<ul>
<li><code>show</code>: Method to show <code>ExprsPredict</code> object.</li>
</ul>

Methods (by generic)

<dl class="dl-horizontal">
<dt><code>pred</code></dt><dd>A factor. Stores class predictions as an unambiguous
class assignment.</dd></dl><dt><code>decision.values</code></dt><dd>Typically a matrix. Stores class predictions
as a decision value.</dd><dt><code>probability</code></dt><dd>Typically a matrix. Stores class predictions
as a probability.</dd><dt><code>actual</code></dt><dd>Typically a factor. Stores known class labels.
Used by <code><a rd-options="" href="/link/calcStats?package=exprso&version=0.1.8" data-mini-rdoc="exprso::calcStats">calcStats</a></code>.</dd>

ExprsPredict-class: An S4 class to store class predictions

Description

Usage

Arguments

Methods (by generic)

Slots

See Also