cleanup_run_dir_images

Removes PNG and JPG files from the root of source/figures/run-xx directories
after all HTML reports have been generated. This cleans up loose image files
that may have been created during report generation.

internal

Pupillometry offers a non-invasive window into the mind and has been used extensively as a psychophysiological readout of arousal signals linked with cognitive processes like attention, stress, and emotional states [Clewett et al. (2020) <doi:10.1038/s41467-020-17851-9>; Kret & Sjak-Shie (2018) <doi:10.3758/s13428-018-1075-y>; Strauch (2024) <doi:10.1016/j.tins.2024.06.002>]. Yet, despite decades of pupillometry research, many established packages and workflows to date lack design patterns based on Findability, Accessibility, Interoperability, and Reusability (FAIR) principles [see Wilkinson et al. (2016) <doi:10.1038/sdata.2016.18>]. 'eyeris' provides a modular, performant, and extensible preprocessing framework for pupillometry data with BIDS-like organization and interactive output reports [Esteban et al. (2019) <doi:10.1038/s41592-018-0235-4>; Gorgolewski et al. (2016) <doi:10.1038/sdata.2016.44>]. Development was supported, in part, by the Stanford Wu Tsai Human Performance Alliance, Stanford Ric Weiland Graduate Fellowship, Stanford Center for Mind, Brain, Computation and Technology, NIH National Institute on Aging Grants (R01-AG065255, R01-AG079345), NSF GRFP (DGE-2146755), McKnight Brain Research Foundation Clinical Translational Research Scholarship in Cognitive Aging and Age-Related Memory Loss, American Brain Foundation, and the American Academy of Neurology.

Shawn Schwartz

eyeris

Flexible, Extensible, & Reproducible Pupillometry Preprocessing

cleanup_run_dir_images function

<dl><dt>report_path</dt>
<dd>Path to the report directory containing source/figures/</dd>
<dt>eye_suffix</dt>
<dd>Optional eye suffix for binocular data</dd>
<dt>verbose</dt>
<dd>Whether to print verbose output</dd></dl>

Arguments

Clean up individual image files in run directories after HTML generation — cleanup_run_dir_images

<dl>

<dt>report_path</dt>
<dd>Path to the report directory containing source/figures/</dd>


<dt>eye_suffix</dt>
<dd>Optional eye suffix for binocular data</dd>


<dt>verbose</dt>
<dd>Whether to print verbose output</dd>

</dl>

cleanup_run_dir_images: Clean up individual image files in run directories after HTML generation

Description

Usage

Value

Arguments