cleanup_source_figures_post_render

Removes the entire source/figures directory after the main HTML report has
been generated since all images are now embedded in the HTML as data URLs.

internal

Pupillometry offers a non-invasive window into the mind and has been used extensively as a psychophysiological readout of arousal signals linked with cognitive processes like attention, stress, and emotional states [Clewett et al. (2020) <doi:10.1038/s41467-020-17851-9>; Kret & Sjak-Shie (2018) <doi:10.3758/s13428-018-1075-y>; Strauch (2024) <doi:10.1016/j.tins.2024.06.002>]. Yet, despite decades of pupillometry research, many established packages and workflows to date lack design patterns based on Findability, Accessibility, Interoperability, and Reusability (FAIR) principles [see Wilkinson et al. (2016) <doi:10.1038/sdata.2016.18>]. 'eyeris' provides a modular, performant, and extensible preprocessing framework for pupillometry data with BIDS-like organization and interactive output reports [Esteban et al. (2019) <doi:10.1038/s41592-018-0235-4>; Gorgolewski et al. (2016) <doi:10.1038/sdata.2016.44>]. Development was supported, in part, by the Stanford Wu Tsai Human Performance Alliance, Stanford Ric Weiland Graduate Fellowship, Stanford Center for Mind, Brain, Computation and Technology, NIH National Institute on Aging Grants (R01-AG065255, R01-AG079345), NSF GRFP (DGE-2146755), McKnight Brain Research Foundation Clinical Translational Research Scholarship in Cognitive Aging and Age-Related Memory Loss, American Brain Foundation, and the American Academy of Neurology.

Shawn Schwartz

eyeris

Flexible, Extensible, & Reproducible Pupillometry Preprocessing

cleanup_source_figures_post_render function

<dl><dt>report_path</dt>
<dd>Path to the report directory</dd>
<dt>eye_suffix</dt>
<dd>Optional eye suffix for binocular data (unused but kept for compatibility)</dd>
<dt>verbose</dt>
<dd>Whether to print verbose output</dd></dl>

Arguments

Clean up source figures after report generation — cleanup_source_figures_post_render

<dl>

<dt>report_path</dt>
<dd>Path to the report directory</dd>


<dt>eye_suffix</dt>
<dd>Optional eye suffix for binocular data (unused but kept for compatibility)</dd>


<dt>verbose</dt>
<dd>Whether to print verbose output</dd>

</dl>

cleanup_source_figures_post_render: Clean up source figures after report generation

Description

Usage

Value

Arguments