find_baseline_structure

Helper function to find the correct baseline structure name that matches
the complex baseline naming scheme used by <code>eyeris</code>.

internal

Pupillometry offers a non-invasive window into the mind and has been used extensively as a psychophysiological readout of arousal signals linked with cognitive processes like attention, stress, and emotional states [Clewett et al. (2020) <doi:10.1038/s41467-020-17851-9>; Kret & Sjak-Shie (2018) <doi:10.3758/s13428-018-1075-y>; Strauch (2024) <doi:10.1016/j.tins.2024.06.002>]. Yet, despite decades of pupillometry research, many established packages and workflows to date lack design patterns based on Findability, Accessibility, Interoperability, and Reusability (FAIR) principles [see Wilkinson et al. (2016) <doi:10.1038/sdata.2016.18>]. 'eyeris' provides a modular, performant, and extensible preprocessing framework for pupillometry data with BIDS-like organization and interactive output reports [Esteban et al. (2019) <doi:10.1038/s41592-018-0235-4>; Gorgolewski et al. (2016) <doi:10.1038/sdata.2016.44>]. Development was supported, in part, by the Stanford Wu Tsai Human Performance Alliance, Stanford Ric Weiland Graduate Fellowship, Stanford Center for Mind, Brain, Computation and Technology, NIH National Institute on Aging Grants (R01-AG065255, R01-AG079345), NSF GRFP (DGE-2146755), McKnight Brain Research Foundation Clinical Translational Research Scholarship in Cognitive Aging and Age-Related Memory Loss, American Brain Foundation, and the American Academy of Neurology.

Shawn Schwartz

eyeris

Flexible, Extensible, & Reproducible Pupillometry Preprocessing

find_baseline_structure function

<dl><dt>eyeris</dt>
<dd>An object of class <code>eyeris</code> derived from <code>load_asc()</code></dd>
<dt>epoch_label</dt>
<dd>The epoch label (without "epoch_" prefix)</dd>
<dt>verbose</dt>
<dd>Logical. Whether to print detailed output (default TRUE)</dd></dl>

Arguments

Find baseline structure name for a given epoch — find_baseline_structure

<dl>

<dt>eyeris</dt>
<dd>An object of class <code>eyeris</code> derived from <code>load_asc()</code></dd>


<dt>epoch_label</dt>
<dd>The epoch label (without "epoch_" prefix)</dd>


<dt>verbose</dt>
<dd>Logical. Whether to print detailed output (default TRUE)</dd>

</dl>

find_baseline_structure: Find baseline structure name for a given epoch

Description

Usage

Value

Arguments