logging

These functions provide a consistent logging interface with automatic
timestamping, glue-style string interpolation, and support for multiple
string arguments.

internal

Pupillometry offers a non-invasive window into the mind and has been used extensively as a psychophysiological readout of arousal signals linked with cognitive processes like attention, stress, and emotional states [Clewett et al. (2020) <doi:10.1038/s41467-020-17851-9>; Kret & Sjak-Shie (2018) <doi:10.3758/s13428-018-1075-y>; Strauch (2024) <doi:10.1016/j.tins.2024.06.002>]. Yet, despite decades of pupillometry research, many established packages and workflows to date lack design patterns based on Findability, Accessibility, Interoperability, and Reusability (FAIR) principles [see Wilkinson et al. (2016) <doi:10.1038/sdata.2016.18>]. 'eyeris' provides a modular, performant, and extensible preprocessing framework for pupillometry data with BIDS-like organization and interactive output reports [Esteban et al. (2019) <doi:10.1038/s41592-018-0235-4>; Gorgolewski et al. (2016) <doi:10.1038/sdata.2016.44>]. Development was supported, in part, by the Stanford Wu Tsai Human Performance Alliance, Stanford Ric Weiland Graduate Fellowship, Stanford Center for Mind, Brain, Computation and Technology, NIH National Institute on Aging Grants (R01-AG065255, R01-AG079345), NSF GRFP (DGE-2146755), McKnight Brain Research Foundation Clinical Translational Research Scholarship in Cognitive Aging and Age-Related Memory Loss, American Brain Foundation, and the American Academy of Neurology.

Shawn Schwartz

eyeris

Flexible, Extensible, & Reproducible Pupillometry Preprocessing

logging function

<dl><dt>...</dt>
<dd>Character strings to be logged. Will be collapsed with spaces.
Supports glue-style interpolation with curly braces.</dd>
<dt>verbose</dt>
<dd>Logical. Whether to actually print the log message.</dd>
<dt>wrap</dt>
<dd>Logical. Whether to wrap long messages (default TRUE).</dd>
<dt>.envir</dt>
<dd>Environment for glue interpolation (default: parent frame).</dd></dl>

Arguments

Standardized logging functions for eyeris — logging

<dl>

<dt>...</dt>
<dd>Character strings to be logged. Will be collapsed with spaces.
Supports glue-style interpolation with curly braces.</dd>


<dt>verbose</dt>
<dd>Logical. Whether to actually print the log message.</dd>


<dt>wrap</dt>
<dd>Logical. Whether to wrap long messages (default TRUE).</dd>


<dt>.envir</dt>
<dd>Environment for glue interpolation (default: parent frame).</dd>

</dl>

logging: Standardized logging functions for eyeris

Description

Arguments