testmat


This data.frame contains example results from fastMLA. It is comprised of example triplets for all three methods of calculating significance: the full CNM, the simple CNM, and the direct estimate method. It is intended for use with examples using mass.CNM or fastboots.GLA


datasets

This package extends the function of the LiquidAssociation package for genome-wide application. It integrates a screening method into the LA analysis to reduce the number of triplets to be examined for a high LA value and provides code for use in subsequent significance analyses.

Tina G

fastLiquidAssociation

functions for genome-wide application of Liquid Association

testmat function

A data frame containing 9 observations of 5 variables (three character("X1 or X2","X2 or X1","X3") and two numeric("est.rho1-rho0"and "GLA.value")

Format

Generated based on results obtained using the Spellman et al. dataset using methods extended from Ho et al.

testmat: Example results from fastMLA requiring all significance methods

Description

Usage

Arguments

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Source

References