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fastLiquidAssociation (version 1.4.0)

functions for genome-wide application of Liquid Association

Description

This package extends the function of the LiquidAssociation package for genome-wide application. It integrates a screening method into the LA analysis to reduce the number of triplets to be examined for a high LA value and provides code for use in subsequent significance analyses.

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Version

Version

1.4.0

License

GPL-2

Maintainer

Tina G

Last Published

February 15th, 2017

Functions in fastLiquidAssociation (1.4.0)

fastMLA-methods

Function to more efficiently screen for gene triplets for those with a high liquid association value.
mass.CNM-methods

Function to obtain CNM significance estimates from an object result of fastMLA.
testmat

Example results from fastMLA requiring all significance methods
fastboots.GLA-methods

Function to parallelize bootstrapping for MLA robust estimates.
fastLiquidAssociation-package

Functions to extend liquid association (LA) analysis for genome-wide use