qc_unzip

Unzip all files in the FastQC result directory. Default is the
 current working directory.

'FASTQC' is the most widely used tool for evaluating the quality of high throughput sequencing data.
It produces, for each sample, an html report and a compressed file containing the raw data.
If you have hundreds of samples, you are not going to open up each 'HTML' page.
You need some way of looking at these data in aggregate.
'fastqcr' Provides helper functions to easily parse, aggregate and analyze
'FastQC' reports for large numbers of samples. It provides a convenient solution for building
a 'Multi-QC' report, as well as, a 'one-sample' report with result interpretations.

Alboukadel Kassambara

fastqcr

Quality Control of Sequencing Data

qc_unzip function

<dl><dt>qc.dir</dt>
<dd>Path to the FastQC result directory.</dd>
<dt>rm.zip</dt>
<dd>logical. If TRUE, remove zipped files after extraction. Default
is TRUE.</dd></dl>

Arguments

Unzip Files in the FastQC Result Directory — qc_unzip

<dl>

<dt>qc.dir</dt>
<dd>Path to the FastQC result directory.</dd>


<dt>rm.zip</dt>
<dd>logical. If TRUE, remove zipped files after extraction. Default
is TRUE.</dd>

</dl>

qc_unzip: Unzip Files in the FastQC Result Directory

Description

Usage

Arguments

Examples