fb4-bioenergetic-plots

<p>Plotting functions for <code>Bioenergetic</code> objects (before running a
simulation). These plots help validate model setup by displaying temperature
profiles (<code>plot_bio_temperature</code>), diet composition over time
(<code>plot_bio_diet</code>), predator energy density
(<code>plot_bio_energy</code>), and an integrated readiness dashboard
(<code>plot_bio_dashboard</code>).</p>

An implementation of the 'Fish Bioenergetics 4.0' framework
described in Deslauriers et al. (2017)
<doi:10.1080/03632415.2017.1377558>. Provides automated parameter
optimization, multi-prey diet modeling, and comprehensive energy budget
simulations for fisheries research and aquaculture applications. An
optional 'TMB' (Template Model Builder) backend delivers 10-50x speedup
in maximum likelihood estimation while maintaining full backward
compatibility. Includes species-specific parameter databases and tools
for modeling fish growth, consumption, and metabolism under varying
environmental conditions.

Hans Ttito

fb4-bioenergetic-plots: Bioenergetic Object Plots for Setup Validation

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