buildCPTs

buildCPTs: a function for building conditional probability tables based on pedigree bayesian network.

Open-source package for computing likelihood ratios in kinship testing and human identification cases (Chernomoretz et al. (2021) <doi:10.1016/j.fsir.2020.100132>). It has the core function of the software GENis, developed by Fundación Sadosky. It relies on a Bayesian Networks framework and is particularly well suited to efficiently perform large-size queries against databases of missing individuals (Darwiche (2009) <doi:10.1017/CBO9780511811357>).

Franco Marsico

fbnet

Forensic Bayesian Networks

Ariel Chernomoretz

buildCPTs function

<dl><dt>bn</dt>
<dd>A bayesian network for pedigree object with information of the genotyped members. The ped object must be in Familias format.</dd>
<dt>bNodePrunning</dt>
<dd>Standard pruning.</dd>
<dt>bStateRemoval</dt>
<dd>State based pruning.</dd>
<dt>bStateRemoval2</dt>
<dd>State based pruning (model 2).</dd>
<dt>lumpingParameter</dt>
<dd>Used for stepwise mutational model.</dd>
<dt>renorm</dt>
<dd>If "row-wise" is selected, zero probability is assigned for transitions out of range.</dd>
<dt>verbose</dt>
<dd>Computations output.</dd></dl>

Arguments

buildCPTs: a function for building conditional probability tables based on pedigree bayesian network. — buildCPTs

<dl>

<dt>bn</dt>
<dd>A bayesian network for pedigree object with information of the genotyped members. The ped object must be in Familias format.</dd>


<dt>bNodePrunning</dt>
<dd>Standard pruning.</dd>


<dt>bStateRemoval</dt>
<dd>State based pruning.</dd>


<dt>bStateRemoval2</dt>
<dd>State based pruning (model 2).</dd>


<dt>lumpingParameter</dt>
<dd>Used for stepwise mutational model.</dd>


<dt>renorm</dt>
<dd>If "row-wise" is selected, zero probability is assigned for transitions out of range.</dd>


<dt>verbose</dt>
<dd>Computations output.</dd>

</dl>

buildCPTs: buildCPTs: a function for building conditional probability tables based on pedigree bayesian network.

Description

Usage

Value

Arguments

Examples