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fda (version 1.2.0)

Functional Data Analysis

Description

These functions were developed to support functional data analysis as described in Ramsay, J. O. and Silverman, B. W. (2005) Functional Data Analysis. New York: Springer. They were ported from earlier versions in Matlab and S-PLUS. A manual that describes the use of these functions is available in this library. The library also contains a number of the data sets used in the book along with R code for the analyses that produced many of the figures in the book.

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Version

Install

install.packages('fda')

Monthly Downloads

15,929

Version

1.2.0

License

GPL version 2 or later

Maintainer

S by Jim Ramsey

Last Published

September 17th, 2024

Functions in fda (1.2.0)

fdPar

Define a Functional Parameter Object
quadset

Quadrature points and weights for Simpson's rule
summary.basisfd

Summarize a Functional Data Object
CanadianWeather

Canadian average annual weather cycle
inprod.bspline

Compute Inner Products B-spline Expansions.
data2fd

Convert Discrete Data to Functional Data
Lfd

Define a Linear Differential Operator Object
eval.posfd

Evaluate a Positive Functional Data Object
cor.fd

Correlation matrix from functional data object(s)
int2Lfd

Convert Integer to Linear Differential Operator
bifd

Create a bivariate functional data object
create.polynomial.basis

Create a Polynomial Basis
exponpen

Exponential Penalty Matrix
powerpen

Power Penalty Matrix
getbasismatrix

Values of Basis Functions or their Derivatives
smooth.basis

Smooth Data with an Indirectly Specified Roughness Penalty
create.bspline.basis

Create a B-spline Basis
fd

Define a Functional Data Object
fourierpen

Fourier Penalty Matrix
create.power.basis

Create a Power Basis Object
deriv.fd

Compute a Derivative of a Functional Data Object
is.fdPar

Confirm Object has Class "fdPar"
center.fd

Center Functional Data
is.Lfd

Confirm Object has Class "Lfd"
create.constant.basis

Create a Constant Basis
density.fd

Compute a Probability Density Function
create.fourier.basis

Create a Fourier Basis
sum.fd

Sum of Functional Data
evaldiag.bifd

Evaluate the Diagonal of a Bivariate Functional Data Object
is.fd

Confirm Object has Class "fd"
bsplineS

B-spline Basis Function Values
summary.bifd

Summarize a Bivariate Functional Data Object
eval.bifd

Values a Two-argument Functional Data Object
objAndNames

Add names to an object
vec2Lfd

Make a Linear Differential Operator Object from a Vector
expect.phi

Expectatation of basis functions
create.monomial.basis

Create a Monomial Basis
fRegress.CV

Computes Cross-validated Error Sum of Squares for a Functional Regression Model
monomial

Evaluate Monomial Basis
fda-internal

FDA internal functions
eval.monfd

Values of a Monotone Functional Data Object
intensity.fd

Intensity Function for Point Process
smooth.morph

Estimates a Smooth Warping Function
plotscores

Plot Principal Component Scores
basisfd

Define a Functional Basis Object
smooth.basisPar

Smooth Data Using a Directly Specified Roughness Penalty
register.fd

Register Functional Data Objects Using a Continuous Criterion
eval.basis

Values of Basis Functions or their Derivatives
linmod

Fit Fully Functional Linear Model
is.basis

Confirm Object is Class "Basisfd"
lambda2gcv

Compute GCV Criterion
plot.fd

Plot a Functional Data Object
create.exponential.basis

Create an Exponential Basis
getbasispenalty

Evaluate a Roughness Penalty Matrix
lambda2df

Convert Smoothing Parameter to Degrees of Freedom
phaseplanePlot

Plane-plane plot
gait

Hip and knee angle while walking
powerbasis

Power Basis Function Values
polyg

Polygonal Basis Function Values
sd.fd

Standard Deviation of Functional Data
fourier

Fourier Basis Function Values
bsplinepen

B-Spline Penalty Matrix
varmx.cca.fd

Rotation of Functional Canonical Components with VARIMAX
summary.fd

Summarize a Functional Data Object
mean.fd

Mean of Functional Data
summary.fdPar

Summarize a Functional Parameter Object
smooth.fd

Smooth a Functional Data Object Using an Indirectly Specified Roughness Penalty
varmx.pca.fd

Rotation of Functional Principal Components with VARIMAX Criterion
plotfit.fd

Plot a Functional Data Object With Data
varmx

Rotate a Matrix of Component Loadings using the VARIMAX Criterion
odesolv

Numerical Solution mth Order Differential Equation System
cycleplot.fd

Plot Cycles for a Periodic Bivariate Functional Data Object
create.polygonal.basis

Create a Polygonal Basis
landmarkreg

Landmark Registration of Functional Observations
cca.fd

Functional Canonical Correlation Analysis
fRegress

A Functional Regression Analysis of the Concurrent Type
smooth.pos

Smooth Data with a Positive Function
var.fd

Variance, Covariance, and Correlation Surfaces for Functional Data Object(s)
summary.Lfd

Summarize a Linear Differential Operator Object
arithmatic.fd

Arithmatic on functional objects
zerofind

Does the range of the input contain 0?
inprod

Inner products of Functional Data Objects.
smooth.fdPar

Smooth a functional data object using a directly specified roughness penalty
axisIntervals

Mark Intervals on a Plot Axis
pda.fd

Principal Differential Analysis
plot.basisfd

Plot a Basis Object
basisfd.product

Product of two basisfd objects
polygpen

Polygonal Penalty Matrix
eval.fd

Values of a Functional Data Object
df2lambda

Convert Degrees of Freedom to a Smoothing Parameter Value
project.basis

Approximate Functional Data Using a Basis
lines.fd

Add Lines from Functional Data to a Plot
pca.fd

Functional Principal Components Analysis
eval.penalty

Evaluate a Basis Penalty Matrix
expon

Exponential Basis Function Values
fRegress.stderr

Compute Standard errors of Coefficient Functions Estimated by Functional Regression Analysis
monomialpen

Evaluate Monomial Roughness Penalty Matrix
smooth.monotone

Monotone Smoothing of Data
onechild

growth in height of one 10-year-old boy
melanoma

melanoma 1936-1972
monthAccessories

Numeric and character vectors to facilitate working with dates
pinch

pinch force data
refinery

Reflux and tray level in a refinery
growth

Berkeley Growth Study data
handwrit

Cursive handwriting samples
lip

Lip motion
nondurables

Nondurable goods index