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fda (version 2.1.3)

Functional Data Analysis

Description

These functions were developed to support functional data analysis as described in Ramsay, J. O. and Silverman, B. W. (2005) Functional Data Analysis. New York: Springer. They were ported from earlier versions in Matlab and S-PLUS. An introduction appears in Ramsay, J. O., Hooker, Giles, and Graves, Spencer (2009) Functional Data Analysis with R and Matlab (Springer). The package includes data sets and script files working many examples including all but one of the 76 figures in this latter book.

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Version

Install

install.packages('fda')

Monthly Downloads

13,909

Version

2.1.3

License

GPL (>= 2)

Maintainer

S by Jim Ramsey

Last Published

October 18th, 2009

Functions in fda (2.1.3)

Hip and knee angle while walking

Convert Smoothing Parameter to Degrees of Freedom

Intensity Function for Point Process

Winsorized Regression

Summarize a Functional Parameter Object

Define a Functional Basis Object

predict.lmWinsor

Predict method for Winsorized linear model fits

fRegress.stderr

Compute Standard errors of Coefficient Functions Estimated by Functional Regression Analysis

Winsorized Regression with mixed effects

Landmark Registration of Functional Observations

create.exponential.basis

Create an Exponential Basis

getbasispenalty

Evaluate a Roughness Penalty Matrix

create.polynomial.basis

Create a Polynomial Basis

Standard Deviation of Functional Data

Convert Integer to Linear Differential Operator

Compute a Derivative of a Functional Data Object

Get subdirectories

Montreal Daily Temperature

Compare dimensions and dimnames of arrays

Functional Data Analysis in R

create.power.basis

Create a Power Basis Object

Smooth Data with a Positive Function

Inner products of Functional Data Objects.

create.fourier.basis

Create a Fourier Basis

Sea Bird Counts

Define a Functional Parameter Object

Create Basis Set for Functional Data Analysis

summary.basisfd

Summarize a Functional Data Object

Plot a functional parameter object with confidence limits

Smooth a Functional Data Object Using an Indirectly Specified Roughness Penalty

Rotation of Functional Principal Components with VARIMAX Criterion

predict.lmeWinsor

Predict method for Winsorized linear model fits with mixed effects

Make a Linear Differential Operator Object from a Vector

Smooth Data with an Indirectly Specified Roughness Penalty

Compute GCV Criterion

Nondurable goods index

Smooth a functional data object using a directly specified roughness penalty

Sum of Functional Data

F-statistic for functional linear regression.

Evaluates a monotone function

Values of a Monotone Functional Data Object

checkLogicalInteger

Does an argument satisfy required conditions?

Center Functional Data

Plot a Functional Data Object

Plot a Basis Object

create.polygonal.basis

Create a Polygonal Basis

Power Basis Function Values

Values of Basis Functions or their Derivatives

Expectation of basis functions

Exponential Basis Function Values

Variance, Covariance, and Correlation Surfaces for Functional Data Object(s)

create.bspline.basis

Create a B-spline Basis

predict.fRegress

Predict method for Functional Regression

Permutation F-test for functional linear regression.

Evaluate the Diagonal of a Bivariate Functional Data Object

Rotation of Functional Canonical Components with VARIMAX

Mark Intervals on a Plot Axis

arithmetic.basisfd

Arithmatic on functional basis objects

Cursive handwriting samples

Values of a Functional Data Object

Convert Degrees of Freedom to a Smoothing Parameter Value

Confirm Object has Class "fd"

Convert a spline object to class 'fd'

Define a Functional Data Object

Confirm Object has Class "Lfd"

create.constant.basis

Create a Constant Basis

Order of a B-spline

Approximate Functional Data Using a Basis

FDA internal functions

Correlation matrix from functional data object(s)

Extract plot labels and names for replicates and variables

Add 'fdaM' to the Matlab path

Create a functional data object from data

Stability Analysis for Principle Differential Analysis

Add Lines from Functional Data to a Plot

Principal Differential Analysis

Fourier Basis Function Values

Plot Principal Component Scores

Phase-plane plot

Copy a file with a default 'to' name

Summarize a Linear Differential Operator Object

Extract the range from a basis object

Functional Principal Components Analysis

basisfd.product

Product of two basisfd objects

Evaluate Monomial Roughness Penalty Matrix

Eigenanalysis preserving dimnames

Functional Regression Analysis

Polygonal Basis Function Values

Power Penalty Matrix

smooth.basisPar

Smooth Data Using a Directly Specified Roughness Penalty

Arithmetic on functional data ('fd') objects

Does the range of the input contain 0?

Rotate a Matrix of Component Loadings using the VARIMAX Criterion

Taylor representation of a B-Spline

Evaluate a Positive Functional Data Object

Statistical Science in Chinese

pinch force data

Plot Cycles for a Periodic Bivariate Functional Data Object

Computes Cross-validated Error Sum of Integrated Squared Errors for a Functional Regression Model

Decomposition for Amplitude and Phase Variation

Support functions for lmWinsor

Values of Basis Functions or their Derivatives

growth in height of one 10-year-old boy

Reshape a vector or array to have 3 dimensions.

Compute Inner Products B-spline Expansions.

B-spline Basis Function Values

Polygonal Penalty Matrix

Extract functional coefficients

Smooth a discrete surface over a rectangular lattice

Plot Functional Principal Components

Add names to an object

CanadianWeather

Canadian average annual weather cycle

residuals.fRegress

Residuals from a Functional Regression

Fourier Penalty Matrix

landmark.reg.expData

Experiment data for landmark registration and alignment

Confirm Object has Class "fdPar"

Plot a Functional Data Object With Data

Summarize a Functional Data Object

Permutation t-test for two groups of functional data objects.

create.monomial.basis

Create a Monomial Basis

singular value decomposition with automatic error handling

Extract the knots from a function basis or data object

smooth.monotone

Monotone Smoothing of Data

melanoma 1936-1972

Register Functional Data Objects Using a Continuous Criterion

Evaluate a Basis Penalty Matrix

Functional Canonical Correlation Analysis

Reflux and tray level in a refinery

Depricated: use 'Data2fd'

Estimates a Smooth Warping Function

Continuously Stirred Tank Reactor

df.residual.fRegress

Degress of Freedom for Residuals from a Functional Regression

Define a Linear Differential Operator Object

Regina Daily Precipitation

Mean of Functional Data

dateAccessories

Numeric and character vectors to facilitate working with dates

Quadrature points and weights for Simpson's rule

Numerical Solution mth Order Differential Equation System

Values a Two-argument Functional Data Object

Confirm Object is Class "Basisfd"

Evaluate Monomial Basis

Summarize a Bivariate Functional Data Object

Check a vector of weights

Swap argvals with y if the latter is simpler.

B-Spline Penalty Matrix

Create a bivariate functional data object

Compute a Probability Density Function

Exponential Penalty Matrix

Tibia Length for One Baby

Berkeley Growth Study data

Plot a Linear Differential Operator Object

Fit Fully Functional Linear Model