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fda (version 2.2.5)

Functional Data Analysis

Description

These functions were developed to support functional data analysis as described in Ramsay, J. O. and Silverman, B. W. (2005) Functional Data Analysis. New York: Springer. They were ported from earlier versions in Matlab and S-PLUS. An introduction appears in Ramsay, J. O., Hooker, Giles, and Graves, Spencer (2009) Functional Data Analysis with R and Matlab (Springer). The package includes data sets and script files working many examples including all but one of the 76 figures in this latter book.

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Version

Install

install.packages('fda')

Monthly Downloads

16,499

Version

2.2.5

License

GPL (>= 2)

Maintainer

S by Jim Ramsey

Last Published

September 22nd, 2010

Functions in fda (2.2.5)

Center Functional Data

Define a Functional Basis Object

Plot Cycles for a Periodic Bivariate Functional Data Object

create.power.basis

Create a Power Basis Object

Expectation of basis functions

Hip and knee angle while walking

Add Lines from Functional Data to a Plot

Values of a Monotone Functional Data Object

Values of Basis Functions or their Derivatives

Convert Smoothing Parameter to Degrees of Freedom

Statistical Science in Chinese

Swap argvals with y if the latter is simpler.

Values of Basis Functions or their Derivatives

Taylor representation of a B-Spline

Computes Cross-validated Error Sum of Integrated Squared Errors for a Functional Regression Model

Exponential Penalty Matrix

Fourier Basis Function Values

Functional Boxplots

Numerical Solution mth Order Differential Equation System

Mark Intervals on a Plot Axis

Add 'fdaM' to the Matlab path

Compare dimensions and dimnames of arrays

Define a Bivariate Functional Parameter Object

Compute a Derivative of a Functional Data Object

Mean of Functional Data

predict.lmeWinsor

Predict method for Winsorized linear model fits with mixed effects

Plot a Linear Differential Operator Object

CanadianWeather

Canadian average annual weather cycle

Define a Functional Parameter Object

Functional Canonical Correlation Analysis

Plot a Functional Data Object With Data

Confirm Object has Class "fdSmooth"

Create a functional data object from data

Summarize a Bivariate Functional Data Object

Rotation of Functional Canonical Components with VARIMAX

Convert a spline object to class 'fd'

Regina Daily Precipitation

Eigenanalysis preserving dimnames

dateAccessories

Numeric and character vectors to facilitate working with dates

Correlation matrix from functional data object(s)

Check a vector of weights

df.residual.fRegress

Degress of Freedom for Residuals from a Functional Regression

create.constant.basis

Create a Constant Basis

create.fourier.basis

Create a Fourier Basis

Smooth Data with an Indirectly Specified Roughness Penalty

Fit Fully Functional Linear Model

Nondurable goods index

FDA internal functions

create.bspline.basis

Create a B-spline Basis

getbasispenalty

Evaluate a Roughness Penalty Matrix

Evaluates a monotone function

Phase-plane plot

Plot Principal Component Scores

Plot a Basis Object

Compute GCV Criterion

melanoma 1936-1972

Montreal Daily Temperature

Smooth a functional data object using a directly specified roughness penalty

fRegress.stderr

Compute Standard errors of Coefficient Functions Estimated by Functional Regression Analysis

Power Basis Function Values

predict.lmWinsor

Predict method for Winsorized linear model fits

Arithmetic on functional data ('fd') objects

Register Functional Data Objects Using a Continuous Criterion

Exponential Basis Function Values

Sum of Functional Data

Summarize a Functional Data Object

Permutation F-test for functional linear regression.

Sea Bird Counts

basisfd.product

Product of two basisfd objects

Decomposition for Amplitude and Phase Variation

Smooth a discrete surface over a rectangular lattice

Create a bivariate functional data object

Functional Data Analysis in R

summary.basisfd

Summarize a Functional Data Object

Variance, Covariance, and Correlation Surfaces for Functional Data Object(s)

Winsorized Regression with mixed effects

Tibia Length for One Baby

Compute a Probability Density Function

Functional Regression Analysis

Reshape a vector or array to have 3 dimensions.

create.polygonal.basis

Create a Polygonal Basis

Create Basis Set for Functional Data Analysis

Extract plot labels and names for replicates and variables

arithmetic.basisfd

Arithmatic on functional basis objects

create.monomial.basis

Create a Monomial Basis

Confirm Object has Class "fd"

Confirm Object has Class "fdPar"

Values of a Functional Data Object

Define a Functional Data Object

create.exponential.basis

Create an Exponential Basis

Landmark Registration of Functional Observations

create.polynomial.basis

Create a Polynomial Basis

Winsorized Regression

Get subdirectories

Compute Inner Products B-spline Expansions.

Smooth Data with a Positive Function

Evaluate the Diagonal of a Bivariate Functional Data Object

Berkeley Growth Study data

growth in height of one 10-year-old boy

Fourier Penalty Matrix

Copy a file with a default 'to' name

Rotation of Functional Principal Components with VARIMAX Criterion

Evaluate Monomial Roughness Penalty Matrix

Stability Analysis for Principle Differential Analysis

residuals.fRegress

Residuals from a Functional Regression

predict.fRegress

Predict method for Functional Regression

B-spline Basis Function Values

Estimates a Smooth Warping Function

Support functions for lmWinsor

Confirm Object has Class "Lfd"

Convert Degrees of Freedom to a Smoothing Parameter Value

Evaluate a Positive Functional Data Object

Does the range of the input contain 0?

Depricated: use 'Data2fd'

Define a Linear Differential Operator Object

Evaluate Monomial Basis

Polygonal Basis Function Values

Confirm Object is Class "Basisfd"

Intensity Function for Point Process

Principal Differential Analysis

Summarize a Linear Differential Operator Object

Functional Principal Components Analysis

Evaluate a Basis Penalty Matrix

Continuously Stirred Tank Reactor

Reflux and tray level in a refinery

B-Spline Penalty Matrix

Permutation t-test for two groups of functional data objects.

Make a Linear Differential Operator Object from a Vector

Cursive handwriting samples

singular value decomposition with automatic error handling

Rotate a Matrix of Component Loadings using the VARIMAX Criterion

Add names to an object

Power Penalty Matrix

Convert Integer to Linear Differential Operator

Values a Two-argument Functional Data Object

Order of a B-spline

Summarize a Functional Parameter Object

Polygonal Penalty Matrix

Plot Functional Principal Components

Extract the knots from a function basis or data object

Plot a Functional Data Object

landmark.reg.expData

Experiment data for landmark registration and alignment

Plot a functional parameter object with confidence limits

Approximate Functional Data Using a Basis

Register Functional Data Objects with Pre-Computed Warping Functions

smooth.monotone

Monotone Smoothing of Data

Smooth a Functional Data Object Using an Indirectly Specified Roughness Penalty

Standard Deviation of Functional Data

pinch force data

Quadrature points and weights for Simpson's rule

F-statistic for functional linear regression.

checkLogicalInteger

Does an argument satisfy required conditions?

Extract functional coefficients

Inner products of Functional Data Objects.

Extract the range from a basis object

smooth.basisPar

Smooth Data Using a Directly Specified Roughness Penalty