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fda (version 2.2.6)

Functional Data Analysis

Description

These functions were developed to support functional data analysis as described in Ramsay, J. O. and Silverman, B. W. (2005) Functional Data Analysis. New York: Springer. They were ported from earlier versions in Matlab and S-PLUS. An introduction appears in Ramsay, J. O., Hooker, Giles, and Graves, Spencer (2009) Functional Data Analysis with R and Matlab (Springer). The package includes data sets and script files working many examples including all but one of the 76 figures in this latter book.

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Version

Install

install.packages('fda')

Monthly Downloads

16,499

Version

2.2.6

License

GPL (>= 2)

Maintainer

S by Jim Ramsey

Last Published

April 7th, 2011

Functions in fda (2.2.6)

Create a bivariate functional data object

Define a Functional Parameter Object

Compare dimensions and dimnames of arrays

Create a functional data object from data

Continuously Stirred Tank Reactor

Reshape a vector or array to have 3 dimensions.

Compute a Derivative of a Functional Data Object

Fourier Basis Function Values

Define a Functional Data Object

Computes Cross-validated Error Sum of Integrated Squared Errors for a Functional Regression Model

Decomposition for Amplitude and Phase Variation

fRegress.stderr

Compute Standard errors of Coefficient Functions Estimated by Functional Regression Analysis

Define a Functional Basis Object

create.polynomial.basis

Create a Polynomial Basis

Eigenanalysis preserving dimnames

Correlation matrix from functional data object(s)

Mean of Functional Data

Does the range of the input contain 0?

Create Basis Set for Functional Data Analysis

Evaluates a monotone function

Cursive handwriting samples

Stability Analysis for Principle Differential Analysis

Compute Inner Products B-spline Expansions.

Functional Data Analysis in R

Statistical Science in Chinese

Taylor representation of a B-Spline

create.fourier.basis

Create a Fourier Basis

arithmetic.basisfd

Arithmatic on functional basis objects

Montreal Daily Temperature

Evaluate the Diagonal of a Bivariate Functional Data Object

getbasispenalty

Evaluate a Roughness Penalty Matrix

Convert Integer to Linear Differential Operator

basisfd.product

Product of two basisfd objects

Hip and knee angle while walking

Define a Bivariate Functional Parameter Object

B-spline Basis Function Values

Extract functional coefficients

Convert a spline object to class 'fd'

Winsorized Regression with mixed effects

landmark.reg.expData

Experiment data for landmark registration and alignment

create.power.basis

Create a Power Basis Object

Copy a file with a default 'to' name

create.monomial.basis

Create a Monomial Basis

Expectation of basis functions

Evaluate a Positive Functional Data Object

Values of a Functional Data Object

predict.lmWinsor

Predict method for Winsorized linear model fits

Arithmetic on functional data ('fd') objects

Compute a Probability Density Function

Mark Intervals on a Plot Axis

Sum of Functional Data

Polygonal Penalty Matrix

Polygonal Basis Function Values

Exponential Penalty Matrix

predict.fRegress

Predict method for Functional Regression

B-Spline Penalty Matrix

Estimates a Smooth Warping Function

Functional Regression Analysis

Plot a Functional Data Object

create.polygonal.basis

Create a Polygonal Basis

Approximate Functional Data Using a Basis

create.constant.basis

Create a Constant Basis

create.bspline.basis

Create a B-spline Basis

Plot Cycles for a Periodic Bivariate Functional Data Object

F-statistic for functional linear regression.

Exponential Basis Function Values

Extract the range from a basis object

Confirm Object has Class "fdPar"

Evaluate a Basis Penalty Matrix

Evaluate Monomial Basis

Get subdirectories

Numerical Solution mth Order Differential Equation System

df.residual.fRegress

Degress of Freedom for Residuals from a Functional Regression

Convert Smoothing Parameter to Degrees of Freedom

Confirm Object has Class "fdSmooth"

Confirm Object is Class "Basisfd"

Functional Canonical Correlation Analysis

Center Functional Data

CanadianWeather

Canadian average annual weather cycle

Register Functional Data Objects Using a Continuous Criterion

Order of a B-spline

Support functions for lmWinsor

Sea Bird Counts

Define a Linear Differential Operator Object

Swap argvals with y if the latter is simpler.

dateAccessories

Numeric and character vectors to facilitate working with dates

Plot a Functional Data Object With Data

Smooth a Functional Data Object Using an Indirectly Specified Roughness Penalty

Confirm Object has Class "fd"

Fit Fully Functional Linear Model

Plot a Linear Differential Operator Object

Compute GCV Criterion

Permutation F-test for functional linear regression.

Smooth a discrete surface over a rectangular lattice

singular value decomposition with automatic error handling

create.exponential.basis

Create an Exponential Basis

Winsorized Regression

FDA internal functions

Rotation of Functional Principal Components with VARIMAX Criterion

Plot Functional Principal Components

Make a Linear Differential Operator Object from a Vector

Depricated: use 'Data2fd'

Berkeley Growth Study data

growth in height of one 10-year-old boy

Nondurable goods index

Intensity Function for Point Process

Correct for initial position error between functional data objects.

Register Functional Data Objects with Pre-Computed Warping Functions

Smooth a functional data object using a directly specified roughness penalty

Values of a Monotone Functional Data Object

Convert Degrees of Freedom to a Smoothing Parameter Value

smooth.basisPar

Smooth Data Using a Directly Specified Roughness Penalty

Inner products of Functional Data Objects.

Extract plot labels and names for replicates and variables

Summarize a Functional Parameter Object

Summarize a Functional Data Object

pinch force data

Landmark Registration of Functional Observations

Power Penalty Matrix

Plot Principal Component Scores

Phase-plane plot

Add Lines from Functional Data to a Plot

residuals.fRegress

Residuals from a Functional Regression

Plot a Basis Object

Tibia Length for One Baby

Smooth Data with an Indirectly Specified Roughness Penalty

Smooth Data with a Positive Function

smooth.monotone

Monotone Smoothing of Data

Regina Daily Precipitation

Functional Boxplots

Plot a functional parameter object with confidence limits

Principal Differential Analysis

Permutation t-test for two groups of functional data objects.

Values of Basis Functions or their Derivatives

Fourier Penalty Matrix

predict.lmeWinsor

Predict method for Winsorized linear model fits with mixed effects

Add 'fdaM' to the Matlab path

Reflux and tray level in a refinery

Extract the knots from a function basis or data object

Values of Basis Functions or their Derivatives

Evaluate Monomial Roughness Penalty Matrix

melanoma 1936-1972

summary.basisfd

Summarize a Functional Data Object

Functional Principal Components Analysis

Summarize a Bivariate Functional Data Object

Summarize a Linear Differential Operator Object

Add names to an object

Confirm Object has Class "Lfd"

Standard Deviation of Functional Data

Power Basis Function Values

Rotate a Matrix of Component Loadings using the VARIMAX Criterion

Rotation of Functional Canonical Components with VARIMAX

checkLogicalInteger

Does an argument satisfy required conditions?

Values a Two-argument Functional Data Object

Quadrature points and weights for Simpson's rule

Variance, Covariance, and Correlation Surfaces for Functional Data Object(s)

Check a vector of weights