ferrn (version 0.3.0)

explore_space_start: Plot the PCA projection of the projection bases space

Description

Plot the PCA projection of the projection bases space

Usage

explore_space_start(dt, group = NULL, pca = TRUE, ...)
explore_space_end(dt, group = NULL, pca = TRUE, ...)
explore_space_pca(
  dt,
  details = FALSE,
  pca = TRUE,
  group = NULL,
  color = NULL,
  facet = NULL,
  ...,
  animate = FALSE
)

Value

a ggplot2 object

Arguments

dt

a data object collected by the projection pursuit guided tour optimisation in tourr

group

the variable to label different runs of the optimiser(s)

pca

logical; if PCA coordinates need to be computed for the data

...

other arguments passed to add_*() functions

details

logical; if components other than start, end and interpolation need to be shown

color

the variable to be coloured by

facet

the variable to be faceted by

animate

logical; if the interpolation path needs to be animated

See Also

Other main plot functions: explore_space_tour(), explore_trace_interp(), explore_trace_search()

Examples

dplyr::bind_rows(holes_1d_geo, holes_1d_better) %>%
  bind_theoretical(matrix(c(0, 1, 0, 0, 0), nrow = 5),
    index = tourr::holes(), raw_data = boa5
  ) %>%
  explore_space_pca(group = method, details = TRUE) +
  scale_color_discrete_botanical()

if (FALSE) {
best <- matrix(c(0, 1, 0, 0, 0), nrow = 5)
dt <- bind_theoretical(holes_1d_jellyfish, best, tourr::holes(), raw_data = boa5)
explore_space_start(dt)
explore_space_end(dt, group = loop, theo_size = 10, theo_color = "#FF0000")
explore_space_pca(
  dt, facet = loop, interp_size = 0.5, theo_size = 10,
  start_size = 1, end_size = 3
  )
}