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fishgrowth (version 1.0.2)

Fit Growth Curves to Fish Data

Description

Fit growth models to otoliths and/or tagging data, using the 'RTMB' package and maximum likelihood. The otoliths (or similar measurements of age) provide direct observed coordinates of age and length. The tagging data provide information about the observed length at release and length at recapture at a later time, where the age at release is unknown and estimated as a vector of parameters. The growth models provided by this package can be fitted to otoliths only, tagging data only, or a combination of the two. Growth variability can be modelled as constant or increasing with length.

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Install

install.packages('fishgrowth')

Monthly Downloads

176

Version

1.0.2

License

GPL-3

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Maintainer

Arni Magnusson

Last Published

April 8th, 2025

Functions in fishgrowth (1.0.2)

otoliths_had

Otolith Data (Haddock)
gompertz

Gompertz Growth Model
gcm

Growth Cessation Model
richardso

Richards Growth Model (Old Style)
gompertzo

Gompertz Growth Model (Old Style)
otoliths_skj

Otolith Data (Skipjack)
pred_band

Prediction Band
richards

Richards Growth Model
fishgrowth-package

Fit Growth Curves to Fish Data
schnute3

Schnute Case 3 Model
vonbert

Von Bertalanffy Growth Model
tags_skj

Tagging Data (Skipjack)
vonberto

Von Bertalanffy Growth Model (Old Style)