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objectsIn some occasions, the optimization algorithm of femlm
may fail to converge, or the variance-covariance matrix may not be available. The most common reason of why this happens is colllinearity among variables. This function helps to find out which set of variables is problematic.
collinearity(x, verbose)
An integer. If higher than or equal to 1, then a note is prompted at each step of the algorithm. By default verbose = 0
for small problems and to 1 for large problems.
It returns a text message with the identified diagnostics.
This function tests: 1) collinearity with the fixed-effect variables, 2) perfect multi-collinearity between the variables, 4) perfect multi-collinearity between several variables and the fixed-effects, and 4) identification issues when there are non-linear in parameters parts.
# NOT RUN {
# Creating an example data base:
set.seed(1)
fe_1 = sample(3, 100, TRUE)
fe_2 = sample(20, 100, TRUE)
x = rnorm(100, fe_1)**2
y = rnorm(100, fe_2)**2
z = rnorm(100, 3)**2
dep = rpois(100, x*y*z)
base = data.frame(fe_1, fe_2, x, y, z, dep)
# creating collinearity problems:
base$v1 = base$v2 = base$v3 = base$v4 = 0
base$v1[base$fe_1 == 1] = 1
base$v2[base$fe_1 == 2] = 1
base$v3[base$fe_1 == 3] = 1
base$v4[base$fe_2 == 1] = 1
# Estimations:
# Collinearity with the fixed-effects:
res_1 = femlm(dep ~ log(x) + v1 + v2 + v4 | fe_1 + fe_2, base)
collinearity(res_1)
# => collinearity with the first fixed-effect identified, we drop v1 and v2
res_1bis = femlm(dep ~ log(x) + v4 | fe_1 + fe_2, base)
collinearity(res_1bis)
# Multi-Collinearity:
res_2 = femlm(dep ~ log(x) + v1 + v2 + v3 + v4, base)
collinearity(res_2)
# }
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