extract_case_study_data

Extracts the data files used by the case study from the zip archive.

The lipid scrambling activity of protein extracts and purified
scramblases is often determined using a fluorescence-based assay involving
many manual steps. flippant offers an integrated solution for the analysis
and publication-grade graphical presentation of dithionite scramblase
assays, as well as a platform for review, dissemination and extension of the
strategies it employs. The package's name derives from a play on the fact
that lipid scrambling is also sometimes referred to as 'flipping'.
The package is originally published as Cotton, R.J., Ploier, B., Goren,
M.A., Menon, A.K., and Graumann, J. (2017). "flippant–An R package for the
automated analysis of fluorescence-based scramblase assays." BMC
Bioinformatics 18, 146. <DOI:10.1186/s12859-017-1542-y>.

Johannes Graumann

flippant

Dithionite Scramblase Assay Analysis

Richard Cotton

extract_case_study_data function

<dl><dt>exdir</dt>
<dd>A string giving the path to the extraction directory. Passed to
<code><a href="/link/unzip?package=flippant&version=1.5.5" data-mini-rdoc="flippant::unzip">unzip</a></code>.</dd>
<dt>files</dt>
<dd>A character vector of files to extract, or <code>NULL</code> to 
extract all files. Passed to <code><a href="/link/unzip?package=flippant&version=1.5.5" data-mini-rdoc="flippant::unzip">unzip</a></code>.</dd></dl>

Arguments

Author

Extract the case study dataset — extract_case_study_data

<dl>

<dt>exdir</dt>
<dd>A string giving the path to the extraction directory. Passed to
<code><a href='https://rdrr.io/r/utils/unzip.html'>unzip</a></code>.</dd>


<dt>files</dt>
<dd>A character vector of files to extract, or <code>NULL</code> to 
extract all files. Passed to <code><a href='https://rdrr.io/r/utils/unzip.html'>unzip</a></code>.</dd>

</dl>

extract_case_study_data: Extract the case study dataset

Description

Usage

Value

Arguments

Author

See Also

Examples