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flowCHIC (version 1.6.0)

Analyze flow cytometric data using histogram information

Description

A package to analyze flow cytometric data of complex microbial communities based on histogram images

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Version

Version

1.6.0

License

GPL-2

Maintainer

Author Joachim Schumann

Last Published

February 15th, 2017

Functions in flowCHIC (1.6.0)

Results_xor_mix

Dataset with labels and intensity values of the first downloadable dataset
Results_overlaps

Dataset with labels and sums of informative pixels within the overlap area of the FCS files included to the package
Results_overlaps_incol

Dataset with labels and sums of informative pixels within the overlap area of the second downloadable dataset
Results_xor

Dataset with labels and intensity values of the FCS files included to the package
Results_xor_incol

Dataset with labels and intensity values of the second downloadable dataset
calculate_overlaps_xor

Calculate overlap and XOR images
abiotic_incol

Dataset with abiotic data
fcs_to_img

FCS files to images
plot_nmds

NMDS plot of samples
flowCHIC-package

Analyze flow cytometric data using histogram information
img_sub

Create image subsets
Results_overlaps_mix

Dataset with labels and sums of informative pixels within the overlap area of the first downloadable dataset