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flowMap (version 1.10.2)

Mapping cell populations in flow cytometry data for cross-sample comparisons using the Friedman-Rafsky Test

Description

flowMap quantifies the similarity of cell populations across multiple flow cytometry samples using a nonparametric multivariate statistical test. The method is able to map cell populations of different size, shape, and proportion across multiple flow cytometry samples. The algorithm can be incorporate in any flow cytometry work flow that requires accurat quantification of similarity between cell populations.

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Version

Version

1.10.2

License

GPL (>=2)

Maintainer

Chiaowen Joyce Hsiao

Last Published

February 15th, 2017

Functions in flowMap (1.10.2)

getFR

FR test for a single cell population pair comparison
getFRest

FR tests to compare two flow cytometry samples
FRstats-class

FR statistics and p-values generated from one single draw of the population pair comparison
makeDistmat

Generate a similarity matrix quantifying similarity between cell populations across flow cytmetry samples
flowMap-package

Flow cytometry data cross-sample comparison
getFRmat

FR tests to compare two flow cytometry samples
statCrossLists

summary statistic across elements of lists