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flowPeaks (version 1.14.0)

An R package for flow data clustering

Description

A fast and automatic clustering to classify the cells into subpopulations based on finding the peaks from the overall density function generated by K-means.

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Version

Version

1.14.0

License

Artistic-1.0

Maintainer

Yongchao Ge

Last Published

February 15th, 2017

Functions in flowPeaks (1.14.0)

assign.flowPeaks

Obtain the flowPeaks cluster lables with the option of identifying outliers and applying to a new data set
plot.flowPeaks

Plot the results generated by flowPeaks
concave

The concave dataset
evalCluster

evaulate the result of a clustering algorihm by comparing it with the gold standard
barcode

The barcode dataset
flowPeaks

Doing the flowPeaks analysis
summary.flowPeaks

The summary of the flowPeaks results
print.flowPeaks

The display of the flowPeaks results
adjust.flowPeaks

Adjusting the smoothing and merging behavior of the flowPeaks results