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flowType (version 2.10.0)

getLabels: getLabels: Returns the labels of the cells in a given phenotype.

Description

Returns the labels of the cells in a given phenotype in a Phenotypes object.

Usage

getLabels(Phenotypes, PhenotypeNumber)

Arguments

Phenotypes
An object of class Phenotypes as produced by the flowType function.
PhenotypeNumber
A numeric or character value representing the phenotypes number of name, respectively.

Value

Membership Labels:
A vector of length of the number of events. 1 and 2 represent the cells that are not-included and included in the phenotype respectively.

References

Nima Aghaeepour, Pratip K. Chattopadhyay, Anuradha Ganesan, Kieran O'Neill, Habil Zare, Adrin Jalali, Holger H. Hoos, Mario Roederer, and Ryan R. Brinkman. Early Immunologic Correlates of HIV Protection can be Identified from Computational Analysis of Complex Multivariate T-cell Flow Cytometry Assays. submitted to Bioinformatics, 2011.

Examples

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