flowWorkspace (version 3.16.0)

transform,GatingSet-method: tranform the flow data asssociated with the GatingSet

Description

The transformation functions are saved in the GatingSet and can be retrieved by getTransformations. Currently only flowJo-type biexponential transformation(either returned by getTransformations or constructed by flowJoTrans) is supported.

Usage

"transform"(`_data`, ...)
"transform"(`_data`, ...)

Arguments

_data

GatingSet or GatingSetList

...

expect a transformList object

Value

a GatingSet or GatingSetList object with the underling flow data transformed.

Examples

## Not run: 
# #construct biexponential transformation function
# biexpTrans <- flowJoTrans(channelRange=4096, maxValue=262144, pos=4.5,neg=0, widthBasis=-10)
# #make a transformList object
# transFuns <- transformList(chnls, biexpTrans)
# #add it to GatingSet
# gs_trans <- transform(gs, transFuns)
# ## End(Not run)