read.particles

Vector of strings containing the locations where the particle coordinates are to be found, or alternatively, the path to the folder

particle.files

Number of frames that will constitute the <code>ParticleSet</code> object

nframes

This function is used to create a <code>ParticleSet</code> object from a vector/list of tab separated text files, each of one containing one line for each
particle in the related frame, alongside with its coordinates and if available, the computed features
The number of frames is also specified, as just a subset of the particle lists can be used for this

flowcatchR is a set of tools to analyze in vivo microscopy imaging
    data, focused on tracking flowing blood cells. It guides the steps from
    segmentation to calculation of features, filtering out particles not of
    interest, providing also a set of utilities to help checking the quality of
    the performed operations (e.g. how good the segmentation was). It allows investigating the 
    issue of tracking flowing cells such as in blood vessels, to categorize the particles in 
    flowing, rolling and adherent. This classification is applied in the study of phenomena such as
    hemostasis and study of thrombosis development. Moreover, flowcatchR presents an integrated 
    workflow solution, based on the integration with a Shiny App and Jupyter notebooks, which is 
    delivered alongside the package, and can enable fully reproducible bioimage analysis in the 
    R environment. 

read.particles: Constructor for a `ParticleSet` object

Description

Usage

Arguments

Value

Examples