flux_param_qua

creates a df with quality flags and quality diagnostics
to print on the plots produced by flux_plot.
flux_param_lm is for fit in the lm family (linear and quadratic)
flux_param_exp is for the exponential fit

internal

Toolbox to process raw data from closed loop flux chamber (or tent)
setups into ecosystem gas fluxes usable for analysis. It goes from a
data frame of gas concentration over time (which can contain several
measurements) and a meta data file indicating which measurement was done
when, to a data frame of ecosystem gas fluxes including quality diagnostics.
Organized with one function per step, maximizing user flexibility and backwards
compatibility. Different models to estimate the fluxes from the raw data are
available: exponential as described in
Zhao et al (2018) <doi:10.1016/j.agrformet.2018.08.022>, exponential as described in
Hutchinson and Mosier (1981) <doi:10.2136/sssaj1981.03615995004500020017x>,
quadratic, and linear. Other functions include quality assessment,
plotting for visual check, calculation of fluxes based on the setup
specific parameters (chamber size, plot area, ...), gross primary production
and transpiration rate calculation, and light response curves.

Joseph Gaudard

fluxible

Ecosystem Gas Fluxes Calculations for Closed Loop Chamber Setup

flux_param_qua function

<dl><dt>slopes_df</dt>
<dd>the slopes_df that is being provided to flux_plot</dd>
<dt>f_datetime</dt>
<dd>column with datetime of each data point</dd></dl>

Arguments

prepares text to print in flux_plot — flux_param_qua

<dl>

<dt>slopes_df</dt>
<dd>the slopes_df that is being provided to flux_plot</dd>


<dt>f_datetime</dt>
<dd>column with datetime of each data point</dd>

</dl>

flux_param_qua: prepares text to print in flux_plot

Description

Usage

Arguments