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Functions for Medical Statistics Book with some Demographic Data

Several utility functions for the book entitled "Practices of Medical and Health Data Analysis using R" (Pearson Education Japan, 2007) with Japanese demographic data and some demographic analysis related functions.

Functions in fmsb

Name Description
JASM Japanese mortality data
WhipplesIndex Whipple's Index
Denny Denny's model mortality for lx and its fitting
GompertzMakeham Gompertz-Makeham's model mortality for u(x) and its fitting
mhchart Draw maternity history charts.
Jlife Completed lifetables in Japan.
Jpop Japanese population data
oddsratio Calculate odds ratio and its confidence intervals
riskdifference Calculate risk difference and its confidence intervals
truemedian Calculate true median for data with ties.
geary.test Geary's test for normality about kurtosis.
riskratio Calculate risk ratio and its confidence intervals
Hadwiger Hadwiger's model fertility and its fitting
IndexOfDissimilarity Index of dissimilarity (ID)
NagelkerkeR2 Calculate Nagelkerke's R squared.
PrefYLL2015 Years of Life Lost by several causes in Japan 2015 for each prefecture
CaretakerRatio Caretaker Ratio
Siler Siler's model mortality for qx and its fitting
VIF Calculate variance inflation factor (VIF) from the result of lm.
CronbachAlpha Calculate Cronbach's alpha coefficient.
S60MPJ Model population of Japan in Showa 60 (1985)
pvalueplot Drawing p-value function plot by a cross table
SIQR Calculate semi-interquartile range
pairwise.fisher.test Exact version of pairwise.prop.test
radarchart Drawing radar chart (a.k.a. spider plot)
percentile Convert numeric vector into its percentile
ratedifference Calculate incidence rate difference and its confidence intervals
rateratio Calculate incidence rate ratio and its confidence intervals
CM Coale and McNeil's model nupitiality and its fitting
CT Coale and Trussell's model marital fertility and its fitting
Jpopl Japanese population data (unshrunken version)
Jvital Longitudinal data of several vital statistics in Japan
gstem Draw the stem and leaf plot in a graphic device.
lifetable Lifetable functions with mutual conversions
roc Calculate Receiver Operating Characteristic (ROC) curve Calculate Spearman's rank correlation with its confidence intervals by SAS method
Jfert Age-specific fertility rates and age-specific marital fertility rates in Japan.
Kappa.test Calculate Cohen's kappa statistics for agreement
Jvital2013byPref Cross sectional data of several vital statistics in Japan 2013 for each prefecture
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Date 2018-04-2
License GPL (>= 2)
NeedsCompilation no
Packaged 2018-04-03 10:03:30 UTC; Minato
Repository CRAN
Date/Publication 2018-04-03 21:37:31 UTC
depends R (>= 2.2.0)
Contributors Minato Nakazawa

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