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fmsb (version 0.7.3)

Functions for Medical Statistics Book with some Demographic Data

Description

Several utility functions for the book entitled "Practices of Medical and Health Data Analysis using R" (Pearson Education Japan, 2007) with Japanese demographic data and some demographic analysis related functions.

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Version

Install

install.packages('fmsb')

Monthly Downloads

15,247

Version

0.7.3

License

GPL (>= 2)

Maintainer

Minato Nakazawa

Last Published

March 1st, 2022

Functions in fmsb (0.7.3)

H27MPJ

Tentative model population of Japan in Heisei 27 (2015)
Denny

Denny's model mortality for lx and its fitting
Kappa.test

Calculate Cohen's kappa statistics for agreement
PrefYLL2015

Years of Life Lost by several causes in Japan 2015 for each prefecture
NagelkerkeR2

Calculate Nagelkerke's R squared.
ORMH

Calculate pooled odds ratio and its confidence intervals with Mantel-Haenszel's method
PEI

Population Expansion Index
RCI

Calculate risk and its confidence interval
mhchart

Draw maternity history charts.
Jvital

Longitudinal data of several vital statistics in Japan
GompertzMakeham

Gompertz-Makeham's model mortality for u(x) and its fitting
Jvital2013byPref

Cross sectional data of several vital statistics in Japan 2013 for each prefecture
oddsratio

Calculate odds ratio and its confidence intervals
geary.test

Geary's test for normality about kurtosis.
WhipplesIndex

Whipple's Index
spearman.ci.sas

Calculate Spearman's rank correlation with its confidence intervals by SAS method
truemedian

Calculate true median for data with ties.
gstem

Draw the stem and leaf plot in a graphic device.
lifetable

Lifetable functions with mutual conversions
IRCI

Calculate a incidence rate with confidence interval
CM

Coale and McNeil's model nupitiality and its fitting
IRCIPois

Calculate incidence rate with its confidence intervals by exact method
Jpop

Japanese population data
CaretakerRatio

Caretaker Ratio
CronbachAlpha

Calculate Cronbach's alpha coefficient.
Jfert

Age-specific fertility rates and age-specific marital fertility rates in Japan.
S60MPJ

Model population of Japan in Showa 60 (1985)
Jpopl

Japanese population data (unshrunken version)
SIQR

Calculate semi-interquartile range
riskratio

Calculate risk ratio and its confidence intervals
percentile

Convert numeric vector into its percentile
pairwise.fisher.test

Exact version of pairwise.prop.test
roc

Calculate Receiver Operating Characteristic (ROC) curve
CT

Coale and Trussell's model marital fertility and its fitting
ratedifference

Calculate incidence rate difference and its confidence intervals
radarchart

Drawing radar chart (a.k.a. spider plot)
Jlife

Completed lifetables in Japan.
Siler

Siler's model mortality for qx and its fitting
VIF

Calculate variance inflation factor (VIF) from the result of lm.
pvalueplot

Drawing p-value function plot by a cross table
pvpORMH

Drawing p-value function plot by stratified or pooled cross tables
rateratio

Calculate incidence rate ratio and its confidence intervals
riskdifference

Calculate risk difference and its confidence intervals
Hadwiger

Hadwiger's model fertility and its fitting
JASM

Japanese mortality data
IndexOfDissimilarity

Index of dissimilarity (ID)