findExclusions

Find markers for which the genotypes of a candidate individual is incompatible with a pedigree

Forensic applications of pedigree analysis, including
likelihood ratios for relationship testing, general relatedness
inference, marker simulation, and power analysis. 'forrel' is part of
the 'pedsuite', a collection of packages for pedigree analysis,
further described in the book 'Pedigree Analysis in R' (Vigeland,
2021, ISBN:9780128244302). Several functions deal specifically with
power analysis in missing person cases, implementing methods described
in Vigeland et al. (2020) <doi:10.1016/j.fsigen.2020.102376>. Data
import from the 'Familias' software (Egeland et al. (2000)
<doi:10.1016/S0379-0738(00)00147-X>) is supported through the
'pedFamilias' package.

Magnus Vigeland

forrel

Forensic Pedigree Analysis and Relatedness Inference

Magnus Dehli Vigeland

Thore Egeland

findExclusions function

<dl><dt>x</dt>
<dd>A <code>ped</code> object or a list of such.</dd>
<dt>id</dt>
<dd>A character of length 1; the name of an untyped member of <code>x</code>.</dd>
<dt>candidate</dt>
<dd>A singleton pedigree, with genotypes for the same markers as <code>x</code>.</dd>
<dt>removeMut</dt>
<dd>A logical. If TRUE (default), all mutations models are stripped.</dd></dl>

Arguments

Find markers excluding an identification — findExclusions

<dl>

<dt>x</dt>
<dd>A <code>ped</code> object or a list of such.</dd>


<dt>id</dt>
<dd>A character of length 1; the name of an untyped member of <code>x</code>.</dd>


<dt>candidate</dt>
<dd>A singleton pedigree, with genotypes for the same markers as <code>x</code>.</dd>


<dt>removeMut</dt>
<dd>A logical. If TRUE (default), all mutations models are stripped.</dd>

</dl>

findExclusions: Find markers excluding an identification

Description

Usage

Value

Arguments

Examples