fqar (version 0.5.6)

species_profile_plot: Plot the co-occurrence profile of a species

Description

species_profile_plot() accepts a species and list of inventories like those generated by assessment_list_inventory() and generates a histogram of the co-occurrence profile of that species. Repeated co-occurrences across multiple assessments are included in summary calculations but self co-occurrences are not.

Usage

species_profile_plot(species, inventory_list, native = FALSE)

Arguments

species

The scientific name of the target plant species

inventory_list

A list of site inventories having the format of assessment_list_inventory()

native

Logical indicating whether only native co-occurrences should be considered.

Examples

# species_profile_plot() is best used in combination with
# download_assessment_list() and assessment_list_inventory().

# \donttest{
ontario <- download_assessment_list(database = 2)
ontario_invs <- assessment_list_inventory(ontario)
species_profile_plot("Aster lateriflorus", ontario_invs, native = TRUE)
# }