giftixml_add_labeltable_from_annot

Computes the LabelTable XML node for the given annotation and adds it to the XML tree.

Provides functions to read and write neuroimaging data in various file formats, with a focus on 'FreeSurfer' <http://freesurfer.net/> formats. This includes, but is not limited to, the following file formats: 1) MGH/MGZ format files, which can contain multi-dimensional images or other data. Typically they contain time-series of three-dimensional brain scans acquired by magnetic resonance imaging (MRI). They can also contain vertex-wise measures of surface morphometry data. The MGH format is named after the Massachusetts General Hospital, and the MGZ format is a compressed version of the same format. 2) 'FreeSurfer' morphometry data files in binary 'curv' format. These contain vertex-wise surface measures, i.e., one scalar value for each vertex of a brain surface mesh. These are typically values like the cortical thickness or brain surface area at each vertex. 3) Annotation file format. This contains a brain surface parcellation derived from a cortical atlas. 4) Surface file format. Contains a brain surface mesh, given by a list of vertices and a list of faces.

Tim Schc3<a4>fer

freesurferformats

Read and Write 'FreeSurfer' Neuroimaging File Formats

Tim Schäfer

giftixml_add_labeltable_from_annot function

<dl><dt>xmltree</dt>
<dd>an XML tree from xml2, typically the return value from <code>gifti_xml</code>.</dd>
<dt>annot</dt>
<dd>an fs.annotation, the included data will be used to compute the LabelTable node</dd></dl>

Arguments

Add a label tabel from an annotation to a GIFTI XML tree. — giftixml_add_labeltable_from_annot

<dl>

<dt>xmltree</dt>
<dd>an XML tree from xml2, typically the return value from <code>gifti_xml</code>.</dd>


<dt>annot</dt>
<dd>an fs.annotation, the included data will be used to compute the LabelTable node</dd>

</dl>

giftixml_add_labeltable_from_annot: Add a label tabel from an annotation to a GIFTI XML tree.

Description

Usage

Value

Arguments