nifti2.write.extensions

Write the header extensions of a NIFTI v2 file.

internal

Provides functions to read and write neuroimaging data in various file formats, with a focus on 'FreeSurfer' formats. This includes, but is not limited to, the following file formats: 1) MGH/MGZ/NIFTI format files, which can contain multi-dimensional images or other data. Typically they contain time-series of three-dimensional brain scans acquired by magnetic resonance imaging (MRI). They can also contain vertex-wise measures of surface morphometry data. The MGH format is named after the Massachusetts General Hospital, and the MGZ format is a compressed version of the same format. 2) 'FreeSurfer' morphometry data files in binary 'curv' format. These contain vertex-wise surface measures, i.e., one scalar value for each vertex of a brain surface mesh. These are typically values like the cortical thickness or brain surface area at each vertex. 3) Annotation file format. This contains a brain surface parcellation derived from a cortical atlas. 4) Surface file format. Contains a brain surface mesh, given by a list of vertices and a list of faces.

Tim Schc3<a4>fer

freesurferformats

Read and Write 'FreeSurfer' Neuroimaging File Formats

Tim Schäfer

Van Essen Lab 

Montreal Neurological Institute (MNI) 

nifti2.write.extensions function

<dl><dt>fh</dt>
<dd>filehandle, a connection to a NIFTI v2 file, positioned at the first byte after the fixed-size header (i.e., where the extension flag bytes go).</dd>
<dt>extensions</dt>
<dd>list of header extensions, see <code>nifti2.extension</code>. An empty list writes the extension flag for 'no extensions present'.</dd>
<dt>endian</dt>
<dd>character string, the endianness of the file, either 'little' or 'big'.</dd></dl>

Arguments

Write the header extensions of a NIFTI v2 file. — nifti2.write.extensions

<dl>

<dt>fh</dt>
<dd>filehandle, a connection to a NIFTI v2 file, positioned at the first byte after the fixed-size header (i.e., where the extension flag bytes go).</dd>


<dt>extensions</dt>
<dd>list of header extensions, see <code>nifti2.extension</code>. An empty list writes the extension flag for 'no extensions present'.</dd>


<dt>endian</dt>
<dd>character string, the endianness of the file, either 'little' or 'big'.</dd>

</dl>

nifti2.write.extensions: Write the header extensions of a NIFTI v2 file.

Description

Usage

Value

Arguments