qc.from.segstats.tables

path to left hemisphere input file, a tab-separated file generated by running the FreeSurfer tools 'aparcstats2table' or 'asegstats2table'. The command line in the system shell would be something like 'aparcstats2table_bin --subjectsfile $subjects_file --meas $measure --hemi $hemi -t $aparc_output_table'.

filepath_lh

path to equivalent right hemisphere input file.

filepath_rh

parameters passed to <code><a rd-options="fsbrain" href="/link/qc.from.regionwise.df?package=fsbrain&version=0.4.2&to=fsbrain" data-mini-rdoc="fsbrain::qc.from.regionwise.df">qc.from.regionwise.df</a></code>.

Determine subjects that potentially failed segmentation, based on segstats table data. The input table file must be a segmentation or parcellation table, generated by running the FreeSurfer tools 'aparcstats2table' or 'asegstats2table' for your subjects.

Provides high-level access to neuroimaging data from standard software packages like 'FreeSurfer' <http://freesurfer.net/> on the level of subjects and groups. Load morphometry data, surfaces and brain parcellations based on atlases. Mask data using labels, load data for specific atlas regions only, and visualize data and statistical results directly in 'R'.

Tim Schc3<a4>fer

fsbrain

Managing and Visualizing Brain Surface Data

Tim Sch<c3><a4>fer

qc.from.segstats.tables function

parameters passed to <code><a rd-options='fsbrain' href='qc.from.regionwise.df'>qc.from.regionwise.df</a></code>.

qc.from.segstats.tables: Perform data quality check based on a segstats table.

Description

Usage

Arguments

Value