Plot standard space data for a group of subjects onto a template brain and combine the tiles into a single large image.
vis.data.on.group.standard(
subjects_dir,
vis_subject_id,
morph_data_both,
captions = NULL,
view_angles = "sd_dorsal",
output_img = "fsbrain_group_morph.png",
num_per_row = 5L,
rglactions = list(no_vis = TRUE),
...
)
character string, the path to the SUBJECTS_DIR containing the template subject
character string, the template subject name. A typical choice is 'fsaverage'.
named list of numerical vectors, 4D array or dataframe, the morph data for both hemispheres of all subjects. Can be loaded with group.morph.standard
or group.morph.standard.sf
.
optional vector of character strings, the short text annotations for the individual tiles. Typically used to plot the subject identifier.
see get.view.angle.names
.
character string, the file path for the output image. Should end with '.png'.
positive integer, the number of tiles per row.
named list. A list in which the names are from a set of pre-defined actions. The values can be used to specify parameters for the action. The following example clips outliers in the data before plotting and writes a screenshot in PNG format: rglactions = list("snapshot_png"="~/fsbrain.png", "clip_data"=c(0.05, 0.95))
. See rglactions
.
extra parameters passed to the subject level visualization function. Not all may make sense in this context. Example: surface='pial'
.
named list, see the return value of arrange.brainview.images.grid
for details.
Other group visualization functions:
vis.data.on.group.native()
,
vis.group.annot()
,
vis.group.coloredmeshes()
,
vis.group.morph.native()
,
vis.group.morph.standard()